You should check out the novel this is based on; it addresses a lot of these points as issues Nick himself has to deal with
This movie alludes to some of it when Nick demands his molecules back -- the novel Nick still isn't a scientist, but learns enough to be able to explain to Alice that his molecules have been changed to "potentials" or some such, meaning he can still eat, but whatever he digests gets turned into more of what he already is (i.e., invisible).
He also gives off no scent (so dogs can't track him) and dirt sticks to him and his clothes less than it would to visible surfaces.
It really gets into the weeds of his existence, including how he sets up a false identity, accounts, etc., all while trying to stay ahead of Jenkins.
Here's a quote:
"The theory seems to be that these objects are not built up out of the same subatomic particles as other physical things. Instead, they are composed of different particles, or perhaps units of energy, but arranged in the same structure as before. Or perhaps they are largely the same particles, only interchanged somehow. There are differing schools of thought. In any case, you have an object with roughly the same properties as the original, except that light passes through it without any refraction. Specific gravity is slightly lower. Mechanical bonding seems to be poorer"
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